SubBioLab

Our publications

in press

Re C*, Fišer Ž*, Perez J, Tacdol A, Trontelj P, Protas ME (2018) Common genetic basis of eye and pigment loss in two distinct cave populations of the isopod crustacean Asellus aquaticus. Integrative and Comparative Biology, accepted. (*equal contribution) link

Lukić M, Delić T, Zagmajster M, Deharveng L (2018) Setting a morphological framework for the genus Verhoeffiella (Collembola, Entomobryidae) for describing new troglomorphic species from the Dinaric karst (Western Balkans). Invertebrate Systematics, accepted.

Zidar P, Škufca D. Prevorčnik S, Kalčikova G, Jemec Kokalj A (2018) Energy reserves in the water louse Asellus aquaticus (Isopoda, Crustacea) from surface and cave populations: seasonal and spatial dynamics. Fundamental and Applied Limonology, accepted.

Verovnik R, Beretta S, Rowlings M (2018) Contribution to the knowledge of the spring butterfly fauna of the southern Anti-Atlas region, Morocco (Lepidoptera, Papilionidea). SHILAP Revista Lepidopterologica, accepted.

2018

Fišer C, Alther R, Zakšek V, Borko Š, Fuchs A, Altermatt F (2018) Translating Niphargus barcodes from Switzerland into taxonomy with a description of two new species (Amphipoda, Niphargidae). ZooKeys 760:113-141 . link

Fišer C, Robinson CT, Malard F (2018) Cryptic species as a window into the paradigm shift of the species concept. Molecular Ecology 27(3): 613-635. link media coverage

Zakšek V, Konec M, Trontelj P (2018) First microsatellite data on Proteus anguinus reveal weak genetic structure between the caves of Postojna and Planina. Aquatic Conservation: Marine and Freshwater Ecosystems 28(1): 241-246. link

Fišer C, Dethier M, Zagmajster M (2018) Overview of Niphargidae (Crustacea: Amphipoda)  in Belgium: distribution, taxonomic notes and conservation issues. Zootaxa 4387 (1): 47-74. link

Eme D*, Zagmajster M*, Delić T, Fišer C, Flot J-F, Konecny-Dupré L, Pálsson S, Stoch F, Zakšek V, Douady C, Malard F (2018) Do cryptic species matter in macroecology? Sequencing European groundwater crustaceans yields small ranges but does not challenge biodiversity detemninats. Ecography 41: 424-436. (* equal contribution) link

Osikowski A, Hofman S, Rysiewska A, Sket B, Prevorčnik S, Falniowski A (2018) A case of biodiversity overestimation in the Balkan Belgrandiella A. J. Wagner, 1927 (Caenogastropoda: Hydrobiidae): molecular divergence not paralleled by high morphological variation. Journal of Natural History 52(5-6):323-344.

Copilaç-Ciocianu D, Fišer C, Borza P, Petrusek A (2018) Is subterranean lifestyle reversible? Independent and recent large-scale dispersal into surface waters by two species of groundwater amphipod genus Niphargus. Molecular Phylogenetics and Evolution 119: 37-49. link

2017

Delić T (2018) First record of a specialized hygropetricolous cave beetle, genus Croatodirus (Coleoptera: Leiodidae), in Slovenia. Natura Sloveniae 19 (2): 55-61. link

Jež M, Verovnik R (2017) Monitoring borovničevega mnogooka Plebejus optilete (Knoch, 1781 ) (Lepidoptera, Lycaenidae) na Pohorju. Natura Sloveniae 19 (2): 15-27. link

Esmaeili-Rineh S, Sari A, Fišer C, Bargrizaneh Z (2017) Completion of molecular taxonomy: description of four amphipod species (Crustacea: Amphipoda: Niphargidae) from Iran and release of database for morphological taxonomy. Zoologischer Anzeiger 271: 57-79. link

Delić T*, Švara V*, Coleman CO, Trontelj P, Fišer C (2017) The giant cryptic amphipod species of the subterranean genus Niphargus (Crustacea, Amphipoda). Zoologica Scripta 46 (6): 740-752. (*equal contribution) media coverage

Copilas-Cioceanu D, Fišer C, Borza P, Balazs G, Angyal D, Petrusek A (2017) Low intraspecific genetic divergence and weak niche differentiation despite wide ranges and extensive sympatry in two epigean Niphargus species (Crustacea: Amphipoda). Zoological Journal of the Linnean Society 181 (3): 485-499. link

Mamaghani-Shishvan M, Esmaeili-Rineh S, Fišer C (2017) An integrated morphological and molecular approach to a new species description of amphipods in the Niphargidae from two caves in Iran. Zoological Studies 56: 33. link

Trontelj P, Aljančič G, Kostanjšek R (2017) Recommendations for a consistent use of vernacular names for Proteus anguinus in English and Slovenian texts. Natura Sloveniae 19(1): 23-24. link

Aljančič G, Naparus-Aljančič M, Trontelj P (2017) Second International Meeting SOS Proteus: “Conservation of black Proteus and its habitat – 30 years after its discovery”. Natura Sloveniae 19(1): 25-26. link

Zakšek V, Trontelj P (2017) Conservation genetics of proteus in the Postojna-Planina Cave System. Natura Sloveniae 19(1): 33-34. link

Fišer Ž, Zakšek V, Naparus-Aljančič M, Aljančič G, Delić T, Trontelj P (2017) The utility of non-genetic data collected during genetic monitoring of proteus populations. Natura Sloveniae 19(1): 35-37. link

Tóth JP, Varga Z, Verovnik R, Wahlberg N, Váradi A, Bereczki J (2017) Mito-nuclear discordance helps to reveal the phylogeographic patterns of Melitaea ornata (Lepidoptera, Nymphalidae). Biological Journal of the Linnean Society 121 (2): 267-281. link

Hudec I, Fišer C,  Dolansky J (2017) Niphargus diadematus sp. n. (Crustacea, Amphipoda, Niphargidae), an inhabitant of a shallow subterranean habitat in South Moravia (Czech Republic). Zootaxa 4291 (1): 41-60. link

Delić T, Trontelj P, Rendoš M, Fišer C (2017) The importance of naming cryptic species and the conservation of endemic subterranean amphipods. Scientific Reports 73391. link media coverage

Jemec A, Škufca D, Prevorčnik S, Fišer Ž, Zidar P (2017) Comparative study of acetylcholinesterase and glutathione S-transferase activities of closely related cave and surface Asellus aquaticus (Isopoda: Crustacea). PLoS One 12(5): e0176746. link

Rysiewska A, Prevorčnik S, Osikowski A, Hofman S, Beran L, Falniowski A (2017) Phylogenetic relationships in Kerkia and introgression between Hauffenia and Kerkia (Caenogastropoda: Hydrobiidae). Journal of Zoological Systematics and Evolutionary Research 55 (2): 106-117.  link

Gorički Š, Stanković D, Snoj A, Kuntner M, Jeffery WR, Trontelj P, Pavićević M, Grizelj Z, Naparus-Aljančič M, Aljančič G (2017) Environmental DNA in subterranean biology: range extension and taxonomic implications for Proteus. Scientific Reports 7: 45054. link

Fišer C, Konec M, Alther R, Švara V, Altermatt F (2017) Taxonomic, phylogenetic and ecological diversity of Niphargus (Amphipoda: Crustacea) in the Hoelloch cave system (Switzerland). Systematics and Biodiversity 15(3): 218-237. link

2016

Trontelj P, Zakšek V(2016) Genetic monitoring of Proteus populations. Natura Sloveniae 18(1): 53-54.

Švara V, Popović M, Peternel A, Radevski Đ, Vukotič K, Verovnik R (2016) Surveys of butterfly and skipper fauna in the southwestern part of the Republic of Macedonia (Lepidoptera: Papilionoidea & Hesperioidea). Natura Sloveniae 18(2): 23-37.

Bračko G, Česnik L (2016) First records of six ant species (Hymenoptera: Formicidae) for Slovenia. Natura Sloveniae 18(2): 39-46.

Bogataj U, Drobne D, Jemec, A, Kostanjšek R, Mrak P, Novak S, Prevorčnik S, Sket B, Trontelj P, Tušek Žnidarič M, Vittori M, Zidar P, Žnidaršič N, Štrus J (2016) Four decades of multidisciplinary studies on isopods: a tribute to Pavel Ličar. Acta Biologica Slovenica 59(2): 5-25.

Verovnik R, Wiemers M (2016) Species delimitation in the Grayling genus Pseudochazara (Lepidoptera, Nymphalidae, Satyrinae) supported by DNA Barcodes. ZooKeys 600: 131-154. link

Bedjanič M, Conniff K, Dow RA, Stokvis FR, Verovnik R, van Tol J (2016) Taxonomy and molecular phylogeny of the Platystictidae of Sri Lanka (Insecta: Odonata). Zootaxa 4182 (1): 001–080 (as monograph).

Verovnik R, Švara V (2016) Confirmed recent occurrence of the Southern Swallowtail (Papilio alexanor Esper, 1799) in Croatia (Lepidoptera: Papilionidae). SHILAP Revista lepidopterologica 44 (176): 547-552.

Zagmajster M, Delić T (2014) Contribution to the knowledge on fauna of caves and springs in Tajan area near Zavidovići (Bosnia and Herzegovina). Naš krš 34: 48. [published in 2016]

Polak S, Delić T, Kostanjšek R, Trontelj P (2016) Molecular phylogeny of the cave beetle Hadesia (Coleoptera: Leiodidae: Cholevinae: Leptodirini), with a description of a new species from Montenegro. Arthropod Systematics and Phylogeny 74(3): 241-254. link.

Utevsky S, Trontelj P (2016) Phylogeography of the southern medicinal leech, Hirudo verbana: a  response to Živić et al. (2015).  Aquatic Ecology 50(1):97-100. link

Prevorčnik S, Konec M, Sket B (2016) The first Turcolana Argano & Pesce, 1980 (Isopoda: Cirolanidae) from the Greek mainland. Zootaxa 4170 (1): 125136.  link

Sidorov DA, Prevorčnik S (2016) A review of the genus Asellus E.L. Geoffery, 1762 (Crustacea: Isopoda: Asellidae) from the Asian part of Russia, with description of plesiomorphic A. turaniacus sp.n.. Arthropoda Selecta 25(2): 157-169. link

Esmaeili-Rineh S, Heidari F, Fišer C, Akmali V (2016) Description of new endemic species of the genus Niphargus Schiödte, 1849 (Amphipoda: Niphargidae) from a karst spring in Zagros Mountains in Iran. Zootaxa 4126 (3): 338-350.

Bračko G, Kiran K, Karaman C, Salata S, Borowiec L (2016) Survey of the ants (Hymenoptera: Formicidae) of the Greek Thrace. Biodiversity Data Journal 4: e7945,  doi: 10.3897/BDJ.4.e7945. link

Alther R, Fišer C, Altermatt F (2016) Description of a widely distributed but overlooked amphipod species in the European Alps. Zoological Journal of the Linnean Society, accepted.

Bregović P, Zagmajster M (2016) Understanding hotspots within a global hotspot – identifying the drivers of regional species richness patterns in terrestrial subterranean habitats. Insect Conservation and Diversity 9 (4): 268-281. link

Konec M, Delić T, Trontelj P (2016) DNA barcoding sheds light on hidden subterranean boundary between Adriatic and Danubian drainage basins. Ecohydrology 9 (7): 1304-1312.  link

Fišer Ž*, Novak L*, Luštrik R, Fišer C (2016) Light triggers habitat choice of eyeless subterranean but not of eyed surface amphipods. The Science of Nature 103: 7. (*equal contribution) link

Delić T, Trontelj P, Zakšek V, Fišer C (2016) Biotic and abiotic determinants of appendage length evolution in a cave amphipod. Journal of Zoology 299: 42-50. link

2015

Jež M, Zakšek V, Štanta R, Zadravec B, Verovnik R (2015): Favna nočnih metuljev (Lepidoptera) na izbranih osvetljenih cerkvah v Sloveniji. Natura Sloveniae 17(2): 17-45

Zagmajster M, David E, Malard F (2015) European Patterns of Species Richness and Range Size in Groundwater Crustaceans. Global Freshwater Biodiversity Atlas atlas.freshwaterbiodiversity.eu

Lukić M, Porco D, Bedos A, Deharveng L (2015) The puzzling distribution of Heteromurus (Verhoeffiella) absoloni Kseneman, 1938 (Collembola: Entomobryidae: Heteromurinae) resolved: detailed redescription of the nominal species and description of a new species from Catalonia (Spain). Zootaxa 4039: 249–275.  link

Verovnik R (2015) Silky Ringlet Erebia gorge vagana (Lepidoptera: Nymphalidae) still surviving on Velebit = Velebitski planinski okaš Erebia gorge vagana (Lepidoptera: Nymphalidae) još uvijek prisutan na Velebitu. Natura Croatica 24: 159-162. link

Koren T, Vukotić K, Verovnik R (2015) Butterflies (Lepidoptera: Papilionoidea & Hesperioidea) of the Croatian islands: new surveys of Vir, Murter, Čiovo and Šolta. Entomologist’s gazette 66: 187-197.

Verovnik R, Franeta F, Popović M, Gascoigne-Pees M (2015) The discovery of Polyommatus aroaniensis (Brown, 1976) in Bosnia and Herzegovina (Lepidoptera: Lycaenidae). Nachrichten des Entomologischen Vereins Apollo 36: 177-180.

Verovnik R, Koren T, Glavan G (2015) Contribution to the knowledge of the butterfly and skipper fauna of northern Dalmatia mainland = Prilog poznavanju faune leptira kopnenog dijela sjeverne Dalmacije. Natura Croatica 24: 265-280. link

Tvrtković N, Verovnik R, Lovrenčić L, Vuković M, Šašić M (2015) New contributions to the knowledge of the butterfly fauna of Mt Velebit and the neighbouring area of Lika (Croatia) = Novi prilozi fauni danjih leptira planine Velebita i susjednih područja Like (Hrvatska). Natura Croatica 24: 281-292. link

Zagmajster M, Dorigo L, Lapini L (2015) First records of European free-tailed bat Tadarida teniotis Rafinesque, 1818 (Chiroptera: Molossidae) in Friuli Venezia Giulia region in NE Italy. Natura Sloveniae 17: 77-84. link

Jež M, Zakšek V, Štanta R, Zadravec B, Verovnik R (2015) Moth fauna (Lepidoptera) at selected illuminated churches in Slovenia. Natura Sloveniae 17: 17-45. link

Lapini L, Dorigo L, Zagmajster M, dall’Asta A (2015) Distribution of two alpine-boreal bat species, Eptesicus nilssonii (Keyserling & Blasius, 1839) and Vespertilio murinus Linnaeus, 1758, in Friuli Venezia Giulia Region (NE Italy). Gortania 36: 115-121. link

Delić T, Sket B (2015) Found after 60 years: the hows and whys of Sphaeromides virei montenigrina (Crustacea: Isopoda: Cirolanidae) rediscovery in Obodska pećina, Montenegro. Natura Sloveniae 17: 59-65. link

Brad T, Fišer C, Flot J-F, Sarbu S (2015) Niphargus dancaui sp.nov. (Amphipoda, Niphargidae) – a new species thriving in sulfidic groundwaters in southeastern Romania. European Journal of Taxonomy 164: 1-28. link

Petković M, Delić T, Lučić L, Fišer C (2015) Description of a new species of Niphargus (Crustacea: Amphipoda: Niphargidae): the first record of a lake ecomorph in the Carpathian Mountains. Zootaxa 4027: 117-129. link

Verovnik R, Fišer Ž, Zakšek V (2015) How to reduce the impact of artificial lighting on moths: A case study on cultural heritage sites in Slovenia. Journal for Nature Conservation 28: 105-111. link

Švara V, Zakšek B, Verovnik R (2015) Contribution to the knowledge of the butterfly fauna of Montenegro (Lepidoptera: Rhopalocera). Acta entomologica slovenica 23: 37-48. link

Micevski N, Franeta F, Gascoigne-Pees M, Micevski B, Verovnik R (2015) Butterfly surveys in Albania during 2014 including the discovery of two new species for the country. Ecologica Montenegrina 3: 1-12. link

Esmaeili-Rineh S, Sari A, Fišer C (2015) Making future taxonomy of Niphargus (Crustacea: Amphipoda: Niphargidae) in the Middle East easier: DELTA database of Middle East species with description of four new species from Iran. Zootaxa 4020: 401-430.  link

Fišer Ž, Altermatt F, Zakšek V, Knapič T, Fišer C (2015) Morphologically cryptic amphipod species are “ecological clones” at regional but not at local scale: A case study of four Niphargus spcies. PLoS One 10(7): e0134384.  link

Švara V, Delić T, Rađa T, Fišer C (2015) Molecular phylogeny of Niphargus boskovici (Crustacea: Amphipoda) reveals a new species from epikarst. Zootaxa 3994: 354-376.  link

Angyal D, Balázs G, Zakšek V,Krízsik V, Fišer C (2015) Redescription of two subterranean amphipods Niphargus molnari Méhely, 1927 and Niphargus gebhardti Schellenberg, 1934 (Amphipoda, Niphargidae) and their phylogenetic position. ZooKeys 509: 53-85.  link

Esmaeili S, Sari A, Delić T, Moškrič A, Fišer C (2015) Molecular Phylogeny  of the Subterranean Genus Niphargus (Crustacea: Amphipoda) in the Middle East: A Comparison with European Niphargids. Zoological Journal of the Linnean Society 175(4): 812-826.  link

Fišer C, Luštrik R, Sarbu S, Flot J-F, Trontelj P (2015) Morphological evolution of coexisting amphipod species pairs from sulfidic caves suggests competitive interactions and character displacement, but no environmental filtering and convergence. PLoS One 10: 1-13. doi: 10.1371/journal.pone.0123535 link

Konec M, Prevorčnik S, Sarbu SM, Verovnik R, Trontelj P (2015) Parallels between two geographically and ecologically disparate cave invasions by the same species, Asellus aquaticus (Isopoda, Crustacea). Journal of Evolutionary Biology 28: 864-875.  link

Ntakis A, Anastasiadou C, Zakšek V, Fišer C (2015) Phylogeny and biogeography of three new species of Niphargus (Crustacea: Amphipoda) from Greece. Zoologischer Anzeiger 255: 32-46.  link

Eme D, Zagmajster M, Fišer C, Galassi D, Marmonier P, Stoch F, Cornu J-F, Oberdorff T, Malard (2015) Multi-causality and spatial non-stationarity in the determinants of groundwater crustacean diversity in Europe. Ecography 38:531-540.  link

Matjaž JEŽ, Valerija ZAKŠEK, Radovan ŠTANTA, Bojan ZADRAVEC, Rudi VEROVNIK (2015): Favna nočnih metuljev (Lepidoptera) na izbranih osvetljenih cerkvah v Sloveniji. Natura Sloveniae 17(2): 17-45.

2014

Minelli A, Sket B, de Jong Y (2014) Fauna Europaea : Annelida – Hirudinea, incl. Acanthobdellea and Branchiobdellea. Biodiversity Data Journal 2: 1-17. doi: 10.3897/BDJ.2.e4015

Giribet G, MyIntyre E, Christian E, Espinasa L, Ferreira RL, Francke OF, Harvey MS, Isaia M, Kovač L, MyCutchen L, Souza MFVR, Zagmajster M (2014) The first phylogenetic analysis of Palpipgradi (Arachnida) – the most enigmatic arthropod order. Invertebrate Systematics  28: 350-360. http://dx.doi.org/10.1071/IS13057

Hou Z, Sket B, Li S (2014) Phylogenetic analyses of Gammaridae crustacean reveal different diversification patterns among sister lineages in the Tethyan region. Cladistics 30(4): 352-365.

Altermatt F, Alther R, Fišer C, Jokela J, Konec M, Küry D, Mächler E, Stucki P, Westram A (2014) Diversity and distribution of freshwater amphipods in Switzerland (Crustacea: Amphipoda). PLoS One 9(10): e110328. doi:  10.1371/journal.pone.0110328

Fišer C, Pipan T, Culver F (2014) The Vertical Extent of Groundwater Metazoans: an Ecological and Evolutionary Perspective. Bioscience 64 (11): 971-979. doi: 10.1093/biosci/biu148

Mamos T, Wattier R, Majda A, Sket B, Grabowski M (2014) Morphological vs. molecular delineation of taxa across montane regions in Europe: the case study of Gammarus balcanicus Schafferna (Crustacea: Amphipoda). Journal of Zoological Systematics and Evolutionary research 52(3): 237-248. doi 10.111/jzs.12062

Zagmajster M, Eme D, Fišer C, Galassi D, Marmonier P, Stoch F, Cornu J-F, Malard F (2014) Geographic variation in range size and beta diversity of groundwater crustaceans: insights from habitats with low thermal seasonality.  Global Ecology and Biogeography 23: 1135-1145.

Popović M, Radaković M, Đurđević A, Franeta F, Verovnik R (2014) Distribution and threats of Phengaris teleius (Lepidoptera: Lycaenidae) in Northern Serbia. Acta zoologica Academiae Scientiarum Hungarica, 60: 173-183.

Russell P, Pateman J, Verovnik R (2014) First record of Melitaea ornata Christoph, 1893, from Slovenia, with notes on its confirmed distribution and hybridisation with M. phoebe ([Denis & Schiffermüller], 1775). Entomologist’s gazette 65: 135-153.

Verovnik R, Popović M, Šašić M, Cuvelier S, Maes D (2014) Wanted! Dead or alive : the tale of the Brown’s Grayling (Pseudochazara amymone). Journal of insect conservation 18: 675-682.

Bračko G, Gomboc M, Lupše B, Marić R, Pristovšek U (2014) New faunistic data on ants (Hymenoptera: Formicidae) of the southern part of Montenegro. Natura Sloveniae 16: 41-51.

Bračko G, Wagner HC, Schulz A, Gioahin E, Matičič J, Tratnik A (2014) New investigation and a revised checklist of the ants (Hymenoptera: Formicidae) of the Republic of Macedonia. North-Western Journal of Zoology 10: 10-24.

2013

Kuntner M, Arnedo MA, Trontelj P, Lokovšek T, Agnarsson I (2013) A molecular phylogeny of nephilid spiders: evolutionary history of a model lineage . Molecular Phylogenetics and Evolution 961-979.

Sindičić M, Polanc P, Gomerčić T, Jelenčič M, Huber Đ, Trontelj P, Skrbinšek T (2013) Genetic data confirm critical status of the reintroduced Dinaric population of Eurasian lynx, 1009-1018. In Conservation Genetics 14 (5).

Culver DC, Trontelj P, Zagmajster M, Pipan T (2013) Paving the Way for Standardized and Comparable Subterranean Biodiversity Studies, 43-50. In Subterranean Biology 10 (July 2012).

Fišer C, Zagmajster M, Zakšek V (2013) Coevolution of life history traits and morphology in female subterranean amphipods. Oikos 122 (5): 770-778. 

Fišer C, Zagmajster M, Ferreira RL  (2013) Two new Amphipod families recorded in South America shed light on an old biogeographical enigma. Systematics and Biodiversity 11(2): 117-139.

Hekmatara M, Zakšek V, Heidari Baladehi M, Fišer C (2013) Two new species of Niphargus (Crustacea: Amphipoda) from Iran, 1421-1449. In Journal of Natural History 47 (21-22).

2012

Erhard Christian, Lubomir Kovač, Roman Ozimec, Slavko Polak, Maja Zagmajster (2012) Distribution and morphology of the European Karst palpigrade Eukoenenia gasparoi ( Arachnida : Palpigradi ), 265-273. In The Journal of Arachnology.

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Peter Trontelj, Andrej Blejec, Cene Fišer (2012) Ecomorphological Convergence of Cave Communities, 3852-3865. In Evolution 66 (12).

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Tanja Pipan, Cene Fišer, Tone Novak, David C Culver (2012) Fifty years of the hypotelminorheic: What have we learned?, 275-285. In Acta Carsologica.

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Tomaž Skrbinšek, Maja Jelenčič, Lisette Waits, Ivan Kos, Klemen Jerina, Peter Trontelj (2012) Monitoring the effective population size of a brown bear (Ursus arctos) population using new single-sample approaches., 862-75. In Molecular Ecology 21 (4).

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Maja Zagmajster, Aila Quadracci, Stefano Filacorda (2012) New records of bats in the province of Trieste (Friuli Venezia Giulia Region), Northeastern Italy, 13-23. In Atti Mus. Civ. Stor. Nat. Trieste.

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Peter Trontelj, Serge Y Utevsky (2012) Phylogeny and phylogeography of medicinal leeches (genus Hirudo): fast dispersal and shallow genetic structure., 475-85. In Molecular Phylogenetics and Evolution 63 (2).

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Peter Trontelj (2012) Natural Selection, 543-549. In Encyclopedia of Caves.

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Cene Fišer (2012) Niphargus: A model system for evolution and ecology, 555-564. In Encyclopedia of Caves.

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2011

Roman Luštrik, Martin Turjak, Simona Kralj-Fišer, Cene Fišer (2011) Coexistence of surface and cave amphipods in an ecotone environment, 133-141. In Contributions to Zoology 80 (2).

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Zhonge Hou, Boris Sket, Cene Fiser, Shuqiang Li (2011) Eocene habitat shift from saline to freshwater promoted Tethyan amphipod diversification., 14533-8. In Proceedings of the National Academy of Sciences of the United States of America 108 (35).

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ME Protas, Peter Trontelj, NH Patel (2011) Genetic basis of eye and pigment loss in the cave crustacean, Asellus aquaticus, 5702-5707. In Proceedings of the National Academy of Sciences USA 108 (14).

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Tamara R. Hartke, Cene Fišer, Jennifer Hohagen, Sascha Kleber, Rainer Hartmann, Stefan Koenemann (2011) Morphological and Molecular Analyses of Closely Related Species In the Stygobiontic Genus Niphargus (Amphipoda), 701-709. In Journal of Crustacean Biology 31 (4).

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Jure Jugovic, Simona Prevorčnik, Andrej Blejec, Boris Sket (2011) Morphological differentiation in the cave shrimps Troglocaris (Crustacea: Decapoda: Atyidae) of the Dinaric karst – a consequence of geographical isolation or adaptation?, 185-195. In Journal of Zoological Systematics and Evolutionary Research 49 (3).

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Ana Ješovnik, Jelena Bujan, Gregor Bračko (2011) One genus and three species of ants (Hymenoptera: Formicidae) new for Croatia, 113-122. In Entomologia Croatica 15 (1-4).

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James D Austin, Angéline Bertin, Jéssica P Bórquez, L Cárdenas, Tatiana Bacry Cardoza, Frank Chapman, Adna Cristina Barbosa De Sousa, Anete Pereira De Souza, Kory C Douglas, Simon R Ellwood, M Ferriol, A Garmendia, Nicolas Gouin, John Hargrove, Madhuri Jasti, I Keränen, K E Knott, Marjeta Konec, K Kuitunen, Marcos Prado Lima, Celeste C Linde, H Merle, M E Oliva, M Pérez, Emily Saarinen, Paul B Samollow, Vera Margarete Scarpassa, I Segura, Leon Smith, Peter Trontelj, I M Valdivia, Hugh Wallwork, M Wellenreuther (2011) Permanent genetic resources added to Molecular Ecology Resources Database 1 February 2011-31 March 2011., 757-758. In Molecular Ecology Resources 11 (4).

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Markus Friedrich, Rui Chen, Bryce Daines, Riyue Bao, Jason Caravas, Puneet K Rai, Maja Zagmajster, Stewart B Peck (2011) Phototransduction and clock gene expression in the troglobiont beetle Ptomaphagus hirtus of Mammoth cave, 3532-41. In The Journal of experimental biology 214 (Pt 21).

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Cene Fišer, Reinhard Gerecke, Claude Meisch, Fabio Stoch (2011) IV|2 Milben (Acari) und Krebstiere (Crustacea), 116-139. In Schirften des Nationalparks Gesaeuse 7. Quellen.

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2010

Alenka Gorjan, Cene Fišer (2010) Comparison of Dynamics of Ground Spider Species Communities in Two Different Habitats, 181-185. In Acta Zoologica Bulgarica 62 (2).

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Cene Fišer, Marjeta Konec, Zala Kobe, Miha Osanič, Pina Gruden, Hubert Potočnik (2010) Conservation problems with hypothelminorheic Niphargus species (Amphipoda: Niphargidae), 602-604. In Aquatic Conservation: Marine and Freshwater Ecosystems 20 (5).

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S Utevsky, M Zagmajster, O. Zinenko, O. Utevska, A. Utevsky, P Trontelj (2010) Distribution and status of medicinal leeches (genus Hirudo) in the Western Palaearctic: anthropogenic, ecological, or historical effects?, 198-210. In Aquatic Conservation: Marine and Freshwater Ecosystems.

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Gregor Bračko (2010) First record of a slave-making ant Myrmoxenus gordiagini Ruzsky, 1902 (Hymenoptera: Formicidae) in Slovenia, 137-142. In Acta Entomologica Slovenica 18 (2).

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Tomaž Skrbinšek, Maja Jelenčič, Lisette Waits, Ivan Kos, Peter Trontelj (2010) Highly efficient multiplex PCR of noninvasive DNA does not require pre-amplification., 495-501. In Molecular Ecology Resources 10 (3).

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Katja Stopar, Andreja Ramsak, Peter Trontelj, Alenka Malej (2010) Lack of genetic structure in the jellyfish Pelagia noctiluca (Cnidaria: Scyphozoa: Semaeostomeae) across European seas., 417-28. In Molecular Phylogenetics and Evolution 57 (1).

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Cene Fišer, Charles Oliver Coleman, Maja Zagmajster, Benjamin Zwittnig, Reinhard Gerecke, Boris Sket (2010) Old museum samples and recent taxonomy: A taxonomic, biogeographic and conservation perspective of the Niphargus tatrensis species complex (Crustacea: Amphipoda), 5-22. In Organisms Diversity & Evolution 10 (1).

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Pablo Hirschegger, Jernej Jakse, Peter Trontelj, Borut Bohanec (2010) Origins of Allium ampeloprasum horticultural groups and a molecular phylogeny of the section Allium (Allium: Alliaceae)., 488-97. In Molecular Phylogenetics and Evolution 54 (2).

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Jure Jugovic, Simona Prevorcnik, Gregor Aljancic, Boris Sket (2010) The atyid shrimp (Crustacea: Decapoda: Atyidae) rostrum: phylogeny versus adaptation, taxonomy versus trophic ecology, 2509-2533. In Journal of Natural History 44 (41-42).

Cene Fišer, Žana Kovačec, Mateja Pustovrh, Peter Trontelj (2010) The role of predation in the diet of Niphargus (Amphipoda: Niphargidae), 4-6. In Speleobiology Notes.

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2009

Peter Trontelj, Christophe J. Douady, Cene Fišer, Janine Gibert, Špela Gorički, Tristan Lefébure, Boris Sket, Valerija Zakšek (2009) A molecular test for cryptic diversity in ground water: how large are the ranges of macro-stygobionts?, 727-744. In Freshwater Biology 54 (4).

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Rudi Verovnik, Simona Prevorčnik, Jure Jugovic (2009) Description of a neotype for Asellus aquaticus Linné, 1758 (Crustacea: Isopoda: Asellidae), with description of a new subterranean Asellus species from Europe, 101-118. In Zoologischer Anzeiger – A Journal of Comparative Zoology 248 (2).

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Elena K. Kupriyanova, Harry a. ten Hove, Boris Sket, Valerija Zakšek, Peter Trontelj, Greg W. Rouse (2009) Evolution of the unique freshwater cave-dwelling tube worm Marifugia cavatica (Annelida: Serpulidae), 389-401. In Systematics and Biodiversity 7 (4).

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S. Prevorčnik, J. Jugovic, B. Sket (2009) Geography of morphological differentiation in Asellus aquaticus (Crustacea: Isopoda: Asellidae), 124-131. In Journal of Zoological Systematics and Evolutionary Research 47 (2).

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L. Deharveng, F. Stoch, J. Gibert, a. Bedos, D. Galassi, M. Zagmajster, a. Brancelj, a. Camacho, F. Fiers, P. Martin, N. Giani, G. Magniez, P. Marmonier (2009) Groundwater biodiversity in Europe, 709-726. In Freshwater Biology 54 (4).

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Peter Trontelj, Cene Fišer (2009) Perspectives: Cryptic species diversity should not be trivialised, 1-3. In Systematics and Biodiversity 7 (1).

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Cene Fišer, Boris Sket, Martin Turjak, Peter Trontelj (2009) Public online databases as a tool of collaborative taxonomy: a case study on subterranean amphipods, 47-56. In Zootaxa 56 (May).

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Valerija Zakšek, Boris Sket, Sanja Gottstein, Damjan Franjević, Peter Trontelj (2009) The limits of cryptic diversity in groundwater: phylogeography of the cave shrimp Troglocaris anophthalmus (Crustacea: Decapoda: Atyidae)., 931-46. In Molecular Ecology 18 (5).

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Cene Fišer, Belgin Çamur-Elipek, Murat Özbek (2009) The subterranean genus Niphargus (Crustacea, Amphipoda) in the Middle East: A faunistic overview with descriptions of two new species, 137-150. In Zoologischer Anzeiger – A Journal of Comparative Zoology 248 (2).

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Cene Fišer, Peter Trontelj, Roman Luštrik, Boris Sket (2009) Toward a unified taxonomy of Niphargus (Crustacea: Amphipoda): a review of morphological variability, 1-22. In Zootaxa.

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2008

Cene Fišer, Boris Sket, Peter Trontelj (2008) A phylogenetic perspective on 160 years of troubled taxonomy of Niphargus (Crustacea: Amphipoda), 665-680. In Zoologica Scripta 37 (6).

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Cene Fišer, Olaf R.P. Bininda-Emonds, Andrej Blejec, Boris Sket (2008) Can heterochrony help explain the high morphological diversity within the genus Niphargus (Crustacea: Amphipoda)?, 146-162. In Organisms Diversity & Evolution 8 (2).

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Boris Sket, Peter Trontelj (2008) Global diversity of leeches (Hirudinea) in freshwater, 129-137. In Hydrobiologia.

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Ljerka Lah, Nada Krasevec, Peter Trontelj, Radovan Komel (2008) High diversity and complex evolution of fungal cytochrome P450 reductase: cytochrome P450 systems., 446-458. In Fungal Genetics and Biology 45 (4).

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2007

Gregor Bračko (2007) Checklist of the ants of Slovenia (Hymenoptera: Formicidae), 15-24. In Natura Sloveniae 9 (1).

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Cene Fišer, Rok Keber, Vesna Kereži, Ajda Moškrič, Anja Palandančić, Vesna Petkovska, Hubert Potočnik, Boris Sket (2007) Coexistence of species of two amphipod genera: Niphargus timavi (Niphargidae) and Gammarus fossarum (Gammaridae), 2641-2651. In Journal of Natural History 41 (41-44).

Mark E Siddall, Peter Trontelj, Serge Y Utevsky, Mary Nkamany, Kenneth S Macdonald (2007) Diverse molecular data demonstrate that commercially available medicinal leeches are not Hirudo medicinalis., 1481-7. In Proceedings Royal Society B 274 (1617).

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Maja Zagmajster, Tomaž Jančar, Jana Mlakar (2007) First records of dead bats (Chiroptera) from wind farms in Croatia, 234-237. In Nyctalus 12 (2-3).

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Serge Y. Utevsky, Andrei Y. Utevsky, Stefano Schiaparelli, Peter Trontelj (2007) Molecular phylogeny of pontobdelline leeches and their place in the descent of fish leeches (Hirudinea, Piscicolidae), 271-280. In Zoologica Scripta 36 (3).

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Valerija Zaksek, Boris Sket, Peter Trontelj (2007) Phylogeny of the cave shrimp Troglocaris: Evidence of a young connection between Balkans and Caucasus., 223-35. In Molecular Phylogenetics and Evolution 42 (1).

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Cene Fišer, Valerija Zakšek, Maja Zagmajster, Boris Sket (2007) Taxonomy and biogeography of Niphargus steueri (Crustacea: Amphipoda), 297-309. In Limnology 8 (3).

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2006

Cene Fišer, Boris Sket, Fabio Stoch (2006) Distribution of four narrowly endemic Niphargus species (Crustacea: Amphipoda) in the western Dinaric region with description of a new species, 77-94. In Zoologischer Anzeiger – A Journal of Comparative Zoology 245 (2).

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Ana Isabel Camacho, Peter Trontelj, Maja Zagmajster (2006) First record of Bathynellacea (Crustacea, Syncarida, Parabathynellidae) in China: a new genus, 1747-1760. In Journal of Natural History 40 (29-31).

T Lefébure, C J Douady, M Gouy, P Trontelj, J Briolay, J Gibert (2006) Phylogeography of a subterranean amphipod reveals cryptic diversity and dynamic evolution in extreme environments., 1797-806. In Molecular Ecology 15 (7).

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Gregor Bračko (2006) Review of the ant fauna (Hymenoptera: Formicidae) of Croatia, 131-156. In Acta Entomologica Slovenica 14 (2).

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DC Culver, Louis Deharveng, Anne Bedos (2006) The mid-latitude biodiversity ridge in terrestrial cave fauna, 120-128. In Ecography.

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2005

Cene Fišer, Galina Azarkina (2005) A Contribution to the Knowledge of the Jumping Spiders ( Salticidae : Araneae ) of the Republic of Macedonia, 299-304. In Acta Zoologica Bulgarica 57 (3).

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Peter Trontelj, Serge Y Utevsky (2005) Celebrity with a neglected taxonomy: molecular systematics of the medicinal leech (genus Hirudo)., 616-24. In Molecular Phylogenetics and Evolution 34 (3).

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Rok Kostanjšek, Cene Fišer (2005) New records of jumping spiders ( Araneae : Salticidae) for Slovenia, 5-11. In Natura Sloveniae 7 (1).

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2004

Cene Fišer (2004) Prispevek k poznavanju škarjevk ( Tanaidacea : Peracarida : Crustacea ) v slovenskem morju, 11-17. In Natura Sloveniae 6 (1).

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Simona Prevorčnik, Andrej Blejec, Boris Sket (2004) Racial differentiation in Asellus aquaticus (L.) (Crustacea: Isopoda: Asellota), 193-214. In Archiv fuer Hydrobiologie 160 (2).

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David C. Culver, Mary C. Christman, Boris Sket, Peter Trontelj (2004) Sampling adequacy in an extreme environment: species richness patterns in Slovenian caves, 1209-1229. In Biodiversity and Conservation 13 (6).

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DC Culver, MC Christman, Irena Šereg (2004) The location of terrestrial species-rich caves in a cave-rich area, 27-32. In Subterranean Biology.

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Boris Sket, Kalust Paragamian, Peter Trontelj (2004) A census of the obligate subterranean fauna of the Balkan Peninsula, 309-322. In Balkan Biodiversity: pattern and process in the European hotspot.

2003

Gregor Bračko (2003) New species for the ant fauna of Slovenia (Hymenoptera: Formicidae), 17-25. In Natura Sloveniae 5 (1).

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Bernhard Schlick-Steiner, Birgit C.; Steiner, Florian M.; Bračko, Gregor; Paill, Wolfgang; Seifert (2003) The temporary social parasite Lasius bicornis (Förster, 1850) new to Slovenia, and Myrmica bessarabica Nassonov, 1889 corrected into M. specioides Bondroit, 1918 (Hymenoptera: Formicidae), 159-162. In Acta Entomologica Slovenica 11 (2).

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2002

2001

Boris Sket, Peter Dovč, Branko Jalžić, Mladen Kerovec, Mladen Kučinić, Peter Trontelj (2001) A cave leech (Hirudinea, Erpobdellidae) from Croatia with unique morphological features, 223-229. In Zoologica Scripta.

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Cene Fišer, Rok Kostanjšek (2001) Prispevek k poznavanju favne pajkov skakačev v Sloveniji ( Araneae , Salticidae ), 33-40. In Natura Sloveniae 3 (2).

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2000

Gernot Segelbacher, Robert J. Paxton, Gunther Steinbruck, Peter Trontelj, Ilse Storch (2000) Characterization of microsatellites in capercaillie Tetrao urogallus (AVES), 1934-1935. In Molecular Ecology.

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Božo Frajman, Cene Fišer (2000) Prispevek k poznavanju opraševalcev vrst Euphorbia, 19-31. In Natura Sloveniae 3 (2).

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1998

Simona Turk-Prevorčnik, Andrej Blejec (1998) Asellus aquaticus infernus, new subspecies (Isopoda: Asellota: Asellidae), from Romanian hypogean waters, 763-773. In journal of crustacean Biology 18 (4).

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